Stem-loop ath-MIR1887

Accession

MI0008304

Description

Arabidopsis thaliana ath-MIR1887 precursor miRNA

Sequence

uuguucacuuagauuguucuuaguaugagguguucucgUACUAAGUAGAGUCUAAGAGAacaa
.(((((.((((((((.(.(((((((((((.....))))))))))).).)))))))).))))).

Structure

u     a        g u           g 
 uguuc cuuagauu u cuuaguaugag u
 ||||| |||||||| | ||||||||||| g
 acaAG GAAUCUGA A GAAUCAUgcuc u
a     A        G U           u 

Annotation confidence Not enough data

Genome context

chr4: 11370263-11370325 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ath-MIR1887

Mature ath-miR1887

• Accession: MIMAT0007854
• Description: Arabidopsis thaliana ath-miR1887 mature miRNA
• Sequence: 39 - UACUAAGUAGAGUCUAAGAGA - 59
• Evidence: experimental ; PARE [1]

References

1. PubMed ID: 18542052
   Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends
   "German MA, Pillay M, Jeong DH, Hetawal A, Luo S, Janardhanan P, Kannan V, Rymarquis LA, Nobuta K, German R, De Paoli E, Lu C, Schroth G, Meyers BC, Green PJ"
   "Nat Biotechnol (2008) 26:941-946