miRBase entry: dan-let-7

Stem-loop dan-let-7


Accession
MI0009004
Description
Drosophila ananassae dan-let-7 precursor miRNA


Sequence

ucuggcaaauUGAGGUAGUAGGUUGUAUAGUagcaacuaagaaucguacuauacaaugugcuagcuuucuuugcuuga
((.((((((..(((.(((((.(((((((((((..............))))))))))).))))).)))..)))))).))

Structure
  u      uU   G     G           gcaacu 
uc ggcaaa  GAG UAGUA GUUGUAUAGUa      a
|| ||||||  ||| ||||| |||||||||||       
ag ucguuu  uuc aucgu uaacauaucau      a
  u      cu   g     g           gcuaag 


Annotation confidence Not enough data
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Genome context
scaffold_12916: 2379181-2379258 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dan-let-7
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dan-let-7

Accession MIMAT0008467
Description Drosophila ananassae dan-let-7 mature miRNA
Sequence 11 - UGAGGUAGUAGGUUGUAUAGU - 31
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218