miRBase entry: dan-mir-6-3

Stem-loop dan-mir-6-3

Accession

MI0009010

Description

Drosophila ananassae dan-mir-6-3 precursor miRNA

Sequence

caaaaagaagggaacggucgcugcugauguaguuauucgcaucauuuaUAUCACAGUGGCUGUUCUUUUUuguuug
((((.((((((((((((((((((.((((((((.............)))))))))))))))))))))))))).))))

Structure

    a                  c        uuauu 
caaa agaagggaacggucgcug ugauguag     c
|||| |||||||||||||||||| ||||||||     g
guuu uUUUUUCUUGUCGGUGAC ACUAUauu     c
    g                  -        uacua

Annotation confidence Not enough data

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Genome context

scaffold_13266: 9732122-9732197 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dan-mir-6-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dan-miR-6

Accession	MIMAT0008462
Description	Drosophila ananassae dan-miR-6 mature miRNA
Sequence	49 - UAUCACAGUGGCUGUUCUUUUU - 70
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218