Stem-loop bfl-mir-33-2

Accession

MI0010018

Description

Branchiostoma floridae bfl-mir-33-2 precursor miRNA

Sequence

acaccuguugcuaggGUGCAUUGUAGUUGCAUUGCAUgugcaacacagaagugcaauguaacugcagugcagcccagaggcaggaac
...((((((.((.((.((((((((((((((((((((((((...))))....)))))))))))))))))))).)).)).))))))...

Structure

aca      g  a  G                    ----    c 
   ccuguu cu gg UGCAUUGUAGUUGCAUUGCA    Ugug  
   |||||| || || ||||||||||||||||||||    |||| a
   ggacgg ga cc acgugacgucaauguaacgu    acac  
caa      a  c  g                    gaag    a 

Annotation confidence Low

Genome context

GG666471.1: 4947944-4948030 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-33-2

Mature bfl-miR-33

• Accession: MIMAT0009474
• Description: Branchiostoma floridae bfl-miR-33 mature miRNA
• Sequence: 16 - GUGCAUUGUAGUUGCAUUGCAU - 37
• Evidence: experimental ; 454 [1], cloned [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49