Stem-loop cte-mir-9

Accession

MI0010052

Description

Capitella teleta cte-mir-9 precursor miRNA

Sequence

gcaugauaaccccauuuuucUCUUUGGUUAUCUAGCUGUAUGAuuuauauuuuacuucaUAAAGCUAGGUUACCAAAGCUAaaacaggggacaaaaucuac
.........((((..((((..(((((((.((((((((.(((((..((.....))..))))).)))))))).)))))))..))))..))))...........

Structure

--gcaugauaa    au    cU       U        G     uu  u 
           cccc  uuuu  CUUUGGU AUCUAGCU UAUGA  ua a
           ||||  ||||  ||||||| |||||||| |||||  || u
           gggg  aaaA  GAAACCA UGGAUCGA AUacu  au u
caucuaaaaca    ac    UC       U        A     uc  u 

Annotation confidence Not enough data

Genome context

KB300095.1: 129658-129758 [+]

Mature cte-miR-9-5p

• Accession: MIMAT0009508
• Description: Capitella teleta cte-miR-9-5p mature miRNA
• Sequence: 21 - UCUUUGGUUAUCUAGCUGUAUGA - 43
• Evidence: experimental ; 454 [1]

Mature cte-miR-9-3p

• Accession: MIMAT0009554
• Description: Capitella teleta cte-miR-9-3p mature miRNA
• Sequence: 60 - UAAAGCUAGGUUACCAAAGCUA - 81
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68