Stem-loop sko-mir-31

Accession

MI0010152

Description

Saccoglossus kowalevskii sko-mir-31 precursor miRNA

Sequence

aaaauucgcaaauuuaguggAGGCAAGAUGUUGGCAUAGCUGuuucgauugaacagucagcuguguccucauauugcccuuucuuuguuugucaccgucac
.......((((((..((.((.(((((.(((..((((((((((...............))))))))))..))).)))))))..))..)))))).........

Structure

--aaaauuc      uu  -u  A     G   UU          uuucga 
         gcaaau  ag  gg GGCAA AUG  GGCAUAGCUG      u
         ||||||  ||  || ||||| |||  ||||||||||      u
         uguuug  uc  uc ccguu uac  cugugucgac      g
cacugccac      uu  uu  -     a   uc          ugacaa 

Annotation confidence Not enough data

Genome context

GL014644.1: 76886-76986 [+]

Mature sko-miR-31

• Accession: MIMAT0009614
• Description: Saccoglossus kowalevskii sko-miR-31 mature miRNA
• Sequence: 21 - AGGCAAGAUGUUGGCAUAGCUG - 42
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68