Stem-loop nve-mir-2035-1

Accession

MI0010302

Description

Nematostella vectensis nve-mir-2035-1 precursor miRNA

Sequence

921 reads, 2956 reads per million, 20 experiments

guggcguauuACAUGGUCUGUUACAAGGGAugaagugcucgaguuucgaguucCCUUGUGACAGCCCAUGGGAgaauu
...........(((((.(((((((((((((......((((((...))))))))))))))))))).)))))........

Structure

guggcguauuA     U             ugaagu      g 
           CAUGG CUGUUACAAGGGA      gcucga  
           ||||| |||||||||||||      |||||| u
           GUACC GACAGUGUUCCcu      ugagcu  
---uuaagAGG     C             ------      u 

Annotation confidence High

Genome context

scaffold_148: 2614-2691 [+]

Mature nve-miR-2035-5p

• Accession: MIMAT0009792
• Description: Nematostella vectensis nve-miR-2035-5p mature miRNA
• Sequence: 11 - ACAUGGUCUGUUACAAGGGA - 30
• Evidence: experimental ; 454 [1], Illumina [2]

Mature nve-miR-2035-3p

• Accession: MIMAT0009793
• Description: Nematostella vectensis nve-miR-2035-3p mature miRNA
• Sequence: 54 - CCUUGUGACAGCCCAUGGGA - 73
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197


2. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663