Stem-loop cfa-mir-190b

Accession

MI0010370

Description

Canis lupus familiaris cfa-mir-190b precursor miRNA

Literature search

1 open access papers mention cfa-mir-190b
(4 sentences)

Sequence

9868 reads, 46.0 reads per million, 79 experiments

ugcuucugugUGAUAUGUUUGAUAUUGGGUUGuuuaauuaggaaucaacuaaauaucgaacauauucuuacagcagug
.(((.(((((.(((((((((((((((.((((((((......))).))))).)))))))))))))))..))))).))).

Structure

u   u     -U               G     -   aa 
 gcu cugug  GAUAUGUUUGAUAUU GGUUG uuu  u
 ||| |||||  ||||||||||||||| ||||| |||   
 uga gacau  uuauacaagcuauaa ucaac aag  u
g   c     uc               a     u   ga 

Annotation confidence Not enough data

Genome context

7: 42908073-42908150 [+]

Mature cfa-miR-190b-5p

• Accession: MIMAT0009873
• Description: Canis lupus familiaris cfa-miR-190b-5p mature miRNA
• Sequence: 11 - UGAUAUGUUUGAUAUUGGGUUG - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39