Stem-loop bfl-mir-135a-1

Accession

MI0010501

Description

Branchiostoma floridae bfl-mir-135a-1 precursor miRNA

Sequence

guguucUAUGGCUUUCAUCCUAUGUGAAuguuaucgcacauguucacauugguggaagucaaagaagacguguguggaaacu
((.((((.(((((((((((..((((((((((........)))))))))).))))))))))).)))).)).............

Structure

-------------  g    A           CU          uau 
             gu uucU UGGCUUUCAUC  AUGUGAAugu   c
             || |||| |||||||||||  ||||||||||    
             ca aaga acugaaggugg  uacacuugua   g
ucaaaggugugug  g    a           -u          cac 

Annotation confidence Not enough data

Genome context

GG666574.1: 3847395-3847476 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from bfl-mir-135a-1

Mature bfl-miR-135a

• Accession: MIMAT0009992
• Description: Branchiostoma floridae bfl-miR-135a mature miRNA
• Sequence: 7 - UAUGGCUUUCAUCCUAUGUGAA - 28
• Evidence: experimental ; cloned [1], 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49