Stem-loop ame-mir-252a

Accession

MI0010608

Description

Apis mellifera ame-mir-252a precursor miRNA

Literature search

2 open access papers mention ame-mir-252a
(2 sentences)

Sequence

aauccugucuuguucAUAAGUACUAGUGCCGCAGGAGugacuagguuggguuagaaauuaccauaucuccugcugcucaagugcuuaucaauggguccgg
...((.(.((((((.(((((((((.(.((.(((((((.......((..(((........)))..))))))))).)).).))))))))).)))))).).))

Structure

aau  u u      c         A U  C       ugacuag  ug   uag 
   cc g cuuguu AUAAGUACU G GC GCAGGAG       gu  ggu   a
   || | |||||| ||||||||| | || |||||||       ||  |||    
   gg c ggguaa uauucguga c cg cguccuc       ua  cca   a
---  c u      c         a u  u       -------  ua   uua 

Annotation confidence Low

Genome context

CM000066.5: 7005854-7005953 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ame-mir-252a

Mature ame-miR-252a-5p

• Accession: MIMAT0010113
• Description: Apis mellifera ame-miR-252a-5p mature miRNA
• Sequence: 16 - AUAAGUACUAGUGCCGCAGGAG - 37
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670