Stem-loop ame-mir-996

Accession

MI0010610

Description

Apis mellifera ame-mir-996 precursor miRNA mir-279

Gene
family

RF00754; mir-279

Literature search

1 open access papers mention ame-mir-996
(1 sentences)

Sequence

aaacagauaauuccauaggcgaguaugaauguggugcacguuuugauuuauuucgUGACUAGAUACAUACUCGUCUacgguaaucuguuuu
((((((((....((.((((((((((((.((.((((.((((.............)))))))).)).)))))))))))).))..)))))))).

Structure

-        aauu  a            a  g    g    uuuug 
 aaacagau    cc uaggcgaguaug au uggu cacg     a
 ||||||||    || |||||||||||| || |||| ||||     u
 uuugucua    gg aUCUGCUCAUAC UA AUCA GUgc     u
u        --au  c            A  G    -    uuuau 

Annotation confidence Low

Genome context

CM000058.5: 9791793-9791883 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ame-mir-996

Mature ame-miR-996-3p

• Accession: MIMAT0010115
• Description: Apis mellifera ame-miR-996-3p mature miRNA
• Sequence: 56 - UGACUAGAUACAUACUCGUCU - 76
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 22409512
   Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
   "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
   "Genes Brain Behav (2012) 11:660-670