Stem-loop sbi-MIR169k

Accession

MI0010876

Description

Sorghum bicolor sbi-MIR169k precursor miRNA

Gene family

MIPF0000037; MIR169_2

Literature search

4 open access papers mention sbi-MIR169k
(23 sentences)

Sequence

CAGCCAAGGAUGACUUGCCGGcuccucaaauuugaagcgucgucuaagcugcugaggcuuaauaaaaacuuagucggcaagucuguccuuggcuaca
.((((((((((((((((((((((...........((((.(((.(......).))).))))...........)))))))))))).))))))))))...

Structure

--C          -            ccucaaauuug    g   u ua 
   AGCCAAGGAU GACUUGCCGGcu           aagc ucg c  a
   |||||||||| ||||||||||||           |||| ||| |   
   ucgguuccug cugaacggcuga           uucg agu g  g
aca          u            uucaaaaauaa    g   c uc 

Annotation confidence Not enough data

Genome context

chr6: 55762145-55762241 [-]

Mature sbi-miR169k

• Accession: MIMAT0011336
• Description: Sorghum bicolor sbi-miR169k mature miRNA
• Sequence: 1 - CAGCCAAGGAUGACUUGCCGG - 21
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556