Stem-loop sbi-MIR171h

Accession

MI0010881

Description

Sorghum bicolor sbi-MIR171h precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

2 open access papers mention sbi-MIR171h
(2 sentences)

Sequence

gguauuggcgcgccucaauccgaaggcguggcugauuuggcauggcagccauguucuuGGAUUGAGCCGCGUCAAUAUCuc
((((((((((((.((((((((((.((((((((((...........)))))))))).)))))))))).))))))))))))..

Structure

--            c          a          auuu 
  gguauuggcgcg cucaauccga ggcguggcug    g
  |||||||||||| |||||||||| ||||||||||    g
  CUAUAACUGCGC GAGUUAGGuu uuguaccgac    c
cu            C          c          ggua 

Annotation confidence Not enough data

Genome context

chr1: 15602519-15602599 [-]

Mature sbi-miR171h

• Accession: MIMAT0011341
• Description: Sorghum bicolor sbi-miR171h mature miRNA
• Sequence: 59 - GGAUUGAGCCGCGUCAAUAUC - 79
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556