Stem-loop sbi-MIR171k

Accession

MI0010884

Description

Sorghum bicolor sbi-MIR171k precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

2 open access papers mention sbi-MIR171k
(2 sentences)

Sequence

cgggauauuggcgcgguucaaucagaaagcuugcgcuccaaagcccaggggcuccacucuuUGAUUGAGCCGUGCCAAUAUCacguc
((.(((((((((((((((((((((((.((...(.(((((........))))).)..)).))))))))))))))))))))))).))..

Structure

--  g                       a  cuu c     aaa 
  cg gauauuggcgcgguucaaucaga ag   g gcucc   g
  || ||||||||||||||||||||||| ||   | |||||    
  gc CUAUAACCGUGCCGAGUUAGUuu uc   c cgggg   c
cu  a                       c  -ac u     acc 

Annotation confidence Not enough data

Genome context

chr6: 56762480-56762566 [-]

Mature sbi-miR171k

• Accession: MIMAT0011344
• Description: Sorghum bicolor sbi-miR171k mature miRNA
• Sequence: 62 - UGAUUGAGCCGUGCCAAUAUC - 82
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556