Stem-loop sbi-MIR172d

Accession

MI0010885

Description

Sorghum bicolor sbi-MIR172d precursor miRNA

Gene family

MIPF0000035; MIR172

Literature search

4 open access papers mention sbi-MIR172d
(30 sentences)

Sequence

uggcaucaucaagauucacaacccauggauccaaauaaaccacugauuuggaucgaggagaugcaugAGAAUCUUGAUGAUGCUGCAu
.((((((((((((((((.((.(((.(.(((((((((.........))))))))).))).).)).....))))))))))))))))....

Structure

---u                ----a  a -  a g         aaa 
    ggcaucaucaagauuc     ca c cc u gauccaaau   c
    ||||||||||||||||     || | || | |||||||||   c
    UCGUAGUAGUUCUAAG     gu g gg a cuagguuua   a
uACG                Aguac  a a  - g         guc 

Annotation confidence Not enough data

Genome context

Unknown

Mature sbi-miR172d

• Accession: MIMAT0011345
• Description: Sorghum bicolor sbi-miR172d mature miRNA
• Sequence: 68 - AGAAUCUUGAUGAUGCUGCA - 87
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556