Stem-loop sbi-MIR393b

Accession

MI0010888

Description

Sorghum bicolor sbi-MIR393b precursor miRNA

Gene family

MIPF0000083; MIR393

Literature search

1 open access papers mention sbi-MIR393b
(1 sentences)

Sequence

UCCAAAGGGAUCGCAUUGAUCucaccugccgcccgccgcugcgccugcgcgcgaggggacaagaucagugcaaucccuuuggaa
(((((((((((.((((((((((....((((.((((((((.......))).))).)))).)))))))))))).))))))))))).

Structure

-           C          cacc  -  g  -   -   ug 
 UCCAAAGGGAU GCAUUGAUCu    ug cc cc cgc cgc  c
 ||||||||||| ||||||||||    || || || ||| |||  g
 agguuucccua cgugacuaga    ac gg gg gcg gcg  c
a           a          ----  a  -  a   c   uc 

Annotation confidence Not enough data

Genome context

chr6: 60459887-60459970 [-]

Mature sbi-miR393b

• Accession: MIMAT0011348
• Description: Sorghum bicolor sbi-miR393b mature miRNA
• Sequence: 1 - UCCAAAGGGAUCGCAUUGAUC - 21
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556