Stem-loop sbi-MIR396d

Accession

MI0010897

Description

Sorghum bicolor sbi-MIR396d precursor miRNA

Gene family

MIPF0000047; MIR396

Literature search

3 open access papers mention sbi-MIR396d
(13 sentences)

Sequence

CUCCACAGGCUUUCUUGAACUGugaacucgaucgcgugcucuuagcuugcuugcucucgcucgcuuuguguugaugguucaagaaaguccuuggaa
.((((..((((((((((((((((.(((.(((..(((.((....(((......)))...)).))).))).))).))))))))))))))))..)))).

Structure

C    CA                g   u   uc   u  ucuu   uu 
 UCCA  GGCUUUCUUGAACUGu aac cga  gcg gc    agc  g
 ||||  |||||||||||||||| ||| |||  ||| ||    |||   
 aggu  cugaaagaacuuggua uug guu  cgc cg    ucg  c
a    uc                g   u   -u   u  -cuc   uu 

Annotation confidence Not enough data

Genome context

chr4: 68279979-68280074 [-]

Mature sbi-miR396d

• Accession: MIMAT0011357
• Description: Sorghum bicolor sbi-miR396d mature miRNA
• Sequence: 1 - CUCCACAGGCUUUCUUGAACUG - 22
• Evidence: not_experimental

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716