Stem-loop sbi-MIR437a

Accession

MI0010902

Description

Sorghum bicolor sbi-MIR437a precursor miRNA

Gene family

MIPF0000746; MIR437

Literature search

3 open access papers mention sbi-MIR437a
(5 sentences)

Sequence

aagucaaacuucucuauguuuuaacuaaguuuauagaaauauauaacaacaucuagaauaccaccaaguuuacagaaauauauauaaugacaucuagaauacaagcaagugcacucucaagauauuaauuugguguuuaauguuggcaccuuuuuauagauuuagucAAAGUUAGAGAAGUUUGACUUag
((((((((((((((((..((((.((((((((((((((((.......((((((.((((....((((((((..................(((.(((((((.(((......)))...)))..)))).))))))))))))))))))))).....)))))))))))))))).)))).))))))))))))))))..

Structure

--                ug    a                uauauaa      c    auac        uuacagaaauauauauaa   c    --   --a   aa 
  aagucaaacuucucua  uuuu acuaaguuuauagaaa       caacau uaga    caccaagu                  uga aucu  aga   uac  g
  ||||||||||||||||  |||| ||||||||||||||||       |||||| ||||    ||||||||                  ||| ||||  |||   |||   
  UUCAGUUUGAAGAGAU  GAAA ugauuuagauauuuuu       guugua auuu    gugguuua                  auu uaga  ucu   gug  c
ga                -U    c                --ccacg      -    ----        ------------------   a    ac   cac   aa 

Annotation confidence Not enough data

Genome context

chr10: 3118652-3118841 [-]

Mature sbi-miR437a

• Accession: MIMAT0011362
• Description: Sorghum bicolor sbi-miR437a mature miRNA
• Sequence: 168 - AAAGUUAGAGAAGUUUGACUU - 188
• Evidence: not_experimental

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716