Stem-loop sbi-MIR437j

Accession

MI0010910

Description

Sorghum bicolor sbi-MIR437j precursor miRNA

Gene family

MIPF0000746; MIR437

Literature search

3 open access papers mention sbi-MIR437j
(5 sentences)

Sequence

gucaaacuucucuaacuuugaccaaguuuauagaaaaugcaccaauaguuucaacgucaaauauguuucauuagauucuccaagaaauaugucuugauagcacauuuauuuguacuuguagauguuaauguauuuuuugaaaaacauggucAAAGUUAGAGAAGUUUGACUU
((((((((((((((((((((((((.((((.(((((((((((..............((((((((((((((..............))))))))).)))))...((((((((........))))))))...)))))))))))..)))).))))))))))))))))))))))))..

Structure

--                        a    -a           ----------------ccaauaguuucaac     -         auuaga 
  gucaaacuucucuaacuuugacca guuu  uagaaaaugca                              gucaa auauguuuc      u
  |||||||||||||||||||||||| ||||  |||||||||||                              ||||| |||||||||       
  CAGUUUGAAGAGAUUGAAAcuggu caaa  guuuuuuaugu                              uaguu uguauaaag      u
UU                        a    aa           aauuguagauguucauguuuauuuacacga     c         aaccuc 

Annotation confidence Not enough data

Genome context

chr1: 80858050-80858221 [+]

Mature sbi-miR437j

• Accession: MIMAT0011370
• Description: Sorghum bicolor sbi-miR437j mature miRNA
• Sequence: 152 - AAAGUUAGAGAAGUUUGACUU - 172
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556