Stem-loop sbi-MIR437o

Accession

MI0010915

Description

Sorghum bicolor sbi-MIR437o precursor miRNA

Gene family

MIPF0000746; MIR437

Literature search

3 open access papers mention sbi-MIR437o
(5 sentences)

Sequence

aagucacuuuuauaacuuugcaagguuuuuagaaaaaugcaccauccucuacaacaucaaauuaguuucauuaaauucucuaugaaauaugucuugguagugcauuuaugugaaccuguagcuguuaauauauuuuuuauaaaaacuuagucAAAGUUAGAGAAGUUUGACUUag
(((((((((((.(((((((((.(((((((((((((((((.........(((((...........(.((((((((((.(.((((.((.......)).)))).).))))).))))).)))))).........)))))))).))))))))).).)))))))).))))))..)))))..

Structure

--     --      a        - a         -        caccauccu     acaucaaauua u     -     u u    g  au 
  aaguc  acuuuu uaacuuug c agguuuuua gaaaaaug         cuaca           g uucau uaaau c cuau aa  a
  |||||  |||||| |||||||| | ||||||||| ||||||||         |||||           | ||||| ||||| | |||| ||  u
  UUCAG  UGAAGA AUUGAAAc g uucaaaaau uuuuuuau         gaugu           c aagug auuua g gaug uu  g
ga     UU      G        u a         a        auaauuguc     ----------- c     u     c u    g  cu 

Annotation confidence Not enough data

Genome context

chr4: 66944221-66944395 [-]

Mature sbi-miR437o

• Accession: MIMAT0011375
• Description: Sorghum bicolor sbi-miR437o mature miRNA
• Sequence: 153 - AAAGUUAGAGAAGUUUGACUU - 173
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556