Stem-loop sbi-MIR437r

Accession

MI0010918

Description

Sorghum bicolor sbi-MIR437r precursor miRNA

Gene family

MIPF0000746; MIR437

Literature search

3 open access papers mention sbi-MIR437r
(5 sentences)

Sequence

aguaaaacuucucuuauuuugaccaagucuauagaaaaauguacuaauauuuacaacaucaaauuaguuuuauucaauucaccaugcaauguguuggagagugaacuuauuugguauuacaguauaggugccaauguauauuucuauaaacuuggccAAAGUUAGAGAAGUUUGACUUag
(((.((((((((((.((((((.((((((.((((((((.(((((((.(((((......(((((((.(((((..((((((.((........)).))))))....))))).))))))).....))))).)))))......)).)))))))).)))))).)))))).)))))))))).)))...

Structure

---   a          u      a      c        a  ------     a     uacaac       u     --ua      u  cca 
   agu aaacuucucu auuuug ccaagu uauagaaa au      guacu auauu      aucaaau aguuu    uucaau ca   u
   ||| |||||||||| |||||| |||||| |||||||| ||      ||||| |||||      ||||||| |||||    |||||| ||    
   UCA UUUGAAGAGA UGAAAc gguuca auaucuuu ua      cgugg uauga      ugguuua ucaag    agguug gu   g
gaU   G          U      c      a        a  uguaac     a     -cauua       u     ugag      u  aac 

Annotation confidence Not enough data

Genome context

chr6: 35916153-35916332 [-]

Mature sbi-miR437r

• Accession: MIMAT0011378
• Description: Sorghum bicolor sbi-miR437r mature miRNA
• Sequence: 158 - AAAGUUAGAGAAGUUUGACUU - 178
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556