Stem-loop cel-mir-2210

Accession

MI0010960

Description

Caenorhabditis elegans cel-mir-2210 precursor miRNA

Literature search

1 open access papers mention cel-mir-2210
(1 sentences)

Sequence

418 reads, 7 reads per million, 8 experiments

AGGCAGAUCAAUCAAUUUUUAGGuuuauauaaauaauccUAAAGUCGAUUGCUCUACCCAC
.((.(((.(((((...(((((((.((((....)))).)))))))..))))).))).))...

Structure

--A  C   U     AAU       u    a 
   GG AGA CAAUC   UUUUAGG uuau u
   || ||| |||||   ||||||| ||||  
   CC UCU GUUAG   GAAAUcc aaua a
CAC  A   C     -CU       u    a 

Annotation confidence Not enough data

Genome context

chrIV: 10914618-10914678 [+]

Mature cel-miR-2210-5p

• Accession: MIMAT0011435
• Description: Caenorhabditis elegans cel-miR-2210-5p mature miRNA
• Sequence: 1 - AGGCAGAUCAAUCAAUUUUUAGG - 23
• Evidence: experimental ; Illumina [1], CLIPseq [2]

Mature cel-miR-2210-3p

• Accession: MIMAT0011436
• Description: Caenorhabditis elegans cel-miR-2210-3p mature miRNA
• Sequence: 40 - UAAAGUCGAUUGCUCUACCCAC - 61
• Evidence: experimental ; Illumina [1], CLIPseq [2]

References

1. PubMed ID: 19460142
   Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
   Kato M, de Lencastre A, Pincus Z, Slack FJ
   Genome Biol (2009) 10:R54


2. PubMed ID: 20062054
   Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans
   "Zisoulis DG, Lovci MT, Wilbert ML, Hutt KR, Liang TY, Pasquinelli AE, Yeo GW"
   "Nat Struct Mol Biol (2010) 17:173-179