Stem-loop cbr-mir-237

Accession

MI0010986

Description

Caenorhabditis briggsae cbr-mir-237 precursor miRNA

Gene family

MIPF0000904; mir-237

Sequence

ucuugaaaaccauguuugguggUCCCUGAGAAUGCUCCGACAUCUucgaaguagcguagCUGUCGAGCACCAUUGGGGAccagcggauuuuugguuauaauuuuuuucaag
.(((((((((((.(((((.((((((((((...(((((.((((.((.((......)).)).)))))))))...)))))))))).)))))...)))).........)))))))

Structure

u       ---------    --u     g          GAA     C    U  u  aa 
 cuugaaa         acca   guuug uggUCCCUGA   UGCUC GACA CU cg  g
 |||||||         ||||   ||||| ||||||||||   ||||| |||| || ||   
 gaacuuu         uggu   uaggc accAGGGGUU   ACGAG CUGU ga gc  u
-       uuuuaauau    uuu     g          ACC     -    C  u  ga 

Annotation confidence Not enough data

Genome context

chrX: 16760695-16760805 [-]

Mature cbr-miR-237-5p

• Accession: MIMAT0011479
• Description: Caenorhabditis briggsae cbr-miR-237-5p mature miRNA
• Sequence: 23 - UCCCUGAGAAUGCUCCGACAUCU - 45
• Evidence: experimental ; 454 [1]

Mature cbr-miR-237-3p

• Accession: MIMAT0011480
• Description: Caenorhabditis briggsae cbr-miR-237-3p mature miRNA
• Sequence: 60 - CUGUCGAGCACCAUUGGGGA - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074