Accession
MI0011021
Description
Caenorhabditis remanei
crm-mir-39 precursor miRNA
Sequence
230393
reads,
2139.0
reads per million, 9 experiments
ugagauccagagagcccAACUGUUUCUUUCCCCGGUAAUAAacuucaacacgacuaUCACCGGGUAUGAAUCAGUUAGgcucuucugguaucuu
.(((((((((((((((.(((((.(((....((((((.(((..(........)..))).))))))...))).))))).))))).))))).)))))
.(((((((((((((((.(((((.(((....((((((.(((..(........)..))).))))))...))).))))).))))).))))).)))))
Structure
u - - c U UUUC A Aa uuc gagau ccaga gagcc AACUG UUC CCCGGU AUA c a ||||| ||||| ||||| ||||| ||| |||||| ||| | uucua ggucu cucgG UUGAC AAG GGGCCA Uau g a - u u A U -UAU C ca cac
Annotation confidence
High
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Genome context
Crem_Contig1: 1740785-1740878 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from crm-mir-39
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature crm-miR-39-5p
| Accession | MIMAT0056828 |
| Description | Caenorhabditis remanei crm-miR-39-5p mature miRNA |
| Sequence | 18 - AACUGUUUCUUUCCCCGGUAAUAA - 41 |
| Evidence |
experimental
454 [1] |
Mature crm-miR-39-3p
| Accession | MIMAT0011506 |
| Description | Caenorhabditis remanei crm-miR-39-3p mature miRNA |
| Sequence | 57 - UCACCGGGUAUGAAUCAGUUAG - 78 |
| Evidence |
experimental
454 [1] |
References
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