Stem-loop crm-mir-81

Accession

MI0011079

Description

Caenorhabditis remanei crm-mir-81 precursor miRNA

Sequence

ccucguggccagcaguCGGUUUUCACCUUGAUCUGAGagcuaaacauaaugcuuaucUGAGAUCAUCGUGAAAGCUAGUugcagguacacaggc
(((.((((((.((((..(((((((((..((((((.(((((..........))...))).))))))..)))))))))..)))).))).)))))).

Structure

-   c   -   a    uC         CU      G   ---  uaaa 
 ccu gug gcc gcag  GGUUUUCAC  UGAUCU AGa   gc    c
 ||| ||| ||| ||||  |||||||||  |||||| |||   ||     
 gga cac ugg cguU  UCGAAAGUG  ACUAGA Ucu   cg    a
c   -   a   a    GA         CU      G   auu  uaau 

Annotation confidence Not enough data

Genome context

Crem_Contig15: 1757270-1757363 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from crm-mir-81

Mature crm-miR-81-5p

• Accession: MIMAT0011569
• Description: Caenorhabditis remanei crm-miR-81-5p mature miRNA
• Sequence: 17 - CGGUUUUCACCUUGAUCUGAG - 37
• Evidence: experimental ; 454 [1]

Mature crm-miR-81-3p

• Accession: MIMAT0011570
• Description: Caenorhabditis remanei crm-miR-81-3p mature miRNA
• Sequence: 58 - UGAGAUCAUCGUGAAAGCUAGU - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074