Accession
MI0011221
Description
Pristionchus pacificus
ppc-mir-56 precursor miRNA
Sequence
gaagaucccuucggugggcucgguggaaucgcuuucgggugcgcgccggcauugcuaugccgUACCCGUAACGCUUCUACCGAGcacuaacaagggucuccucuuc
..(((.(((((.(..(((((((((((((.((.((.((((((((.((.(((...)))..)))))))))).)))).))))))))))).))..))))))))).......
..(((.(((((.(..(((((((((((((.((.((.((((((((.((.(((...)))..)))))))))).)))).))))))))))).))..))))))))).......
Structure
-----ga u c gu - u c u c -c a
aga cccuu g gg gcucgguggaa cg uu cgggugcg gc ggc
||| ||||| | || ||||||||||| || || |||||||| || ||| u
ucu gggaa c uc cGAGCCAUCUU GC AA GCCCAUgc cg ucg
cuucucc - - aa a C - U - ua u
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
ABKE03000094.1: 1044609-1044714 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppc-mir-56
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppc-miR-56
| Accession | MIMAT0011717 |
| Description | Pristionchus pacificus ppc-miR-56 mature miRNA |
| Sequence | 63 - UACCCGUAACGCUUCUACCGAG - 84 |
| Evidence |
experimental
454 [1] |
References
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