Stem-loop hbv-mir-B4

Accession

MI0011556

Description

Herpes B virus hbv-mir-B4 precursor miRNA

Sequence

gcccggcgccccgggcuauccacgccccuucggcccggccggacgcgggggcggACGGGGCGUGGUUGGUGGGCGgggc
((((..(((((...((((.(((((((((((((.(((.((.....)).))).)))).))))))))).)))))))))))))

Structure

    gg     cgg    u         -    g   g  c 
gccc  cgccc   gcua ccacgcccc uucg ccc gc g
||||  |||||   |||| ||||||||| |||| ||| || g
cggg  GCGGG   UGGU GGUGCGGGG Aggc ggg cg a
    --     ---    U         C    g   g  c 

Annotation confidence Not enough data

Genome context

NC_004812: 112311-112389 [+]

Mature hbv-miR-B4

• Accession: MIMAT0012171
• Description: Herpes B virus hbv-miR-B4 mature miRNA
• Sequence: 55 - ACGGGGCGUGGUUGGUGGGCG - 75
• Evidence: experimental ; Northern [1]

References

1. PubMed ID: 19144716
   Discovery of herpes B virus-encoded microRNAs
   "Besecker MI, Harden ME, Li G, Wang XJ, Griffiths A"
   "J Virol (2009) 83:3413-3416