Stem-loop bmo-mir-2733a-1

Accession

MI0012182

Description

Bombyx mori bmo-mir-2733a-1 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2733a-1
(4 sentences)

Sequence

5 reads, 1 reads per million, 2 experiments

uuucucucuaauacagucaucacacucucaguugauauguguaacauucuaUCACUGGGUGCAUGAUGAUUGUgguacagagau
..(((((.((.(((((((((((..(.((((((.((((.(((...)))..)))))))))).)..))))))))))).)).))))).

Structure

uu     c  a           ca u      u    -u   u 
  ucucu ua uacagucauca  c cucagu gaua  gug  
  ||||| || |||||||||||  | |||||| ||||  ||| a
  agaga au gUGUUAGUAGU  G GGGUCA CUau  uac  
-u     c  g           AC U      -    cu   a 

Annotation confidence Not enough data

Genome context

NW_004581684.1: 347677-347760 [-]

Clustered miRNAs

14 other miRNAs are < 10 kb from bmo-mir-2733a-1

Mature bmo-miR-2733a-5p

• Accession: MIMAT0012611
• Description: Bombyx mori bmo-miR-2733a-5p mature miRNA
• Sequence: 52 - UCACUGGGUGCAUGAUGAUUGU - 73
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 19699294
   A discovery of novel microRNAs in the silkworm (Bombyx mori) genome
   "Yu X, Zhou Q, Cai Y, Luo Q, Lin H, Hu S, Yu J"
   "Genomics (2009) 94:438-444