Stem-loop dpu-mir-2-2

Accession

MI0012239

Description

Daphnia pulex dpu-mir-2-2 precursor miRNA

Literature search

1 open access papers mention dpu-mir-2-2
(6 sentences)

Sequence

caagggugucguguguauuagcuugucagagugguugugaugugcgucauguuguacucgUAUCACAGCCAGCUUUGAUGAGCgcuacgcucgacuuguug
(((.((.((((.(((((...((((((((((((((((((((((((((......)))))....)))))))))).)))))))))))..))))).)))))).)))

Structure

   g  u    u     uua           -          ----     uc 
caa gg gucg gugua   gcuugucagag ugguugugau    gugcg  a
||| || |||| |||||   ||||||||||| ||||||||||    |||||   
guu uu cagc cgcau   CGAGUAGUUUC ACCGACACUA    caugu  u
   g  -    u     -cg           G          Ugcu     ug 

Annotation confidence Not enough data

Genome context

GL732602.1: 241023-241123 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dpu-mir-2-2

Mature dpu-miR-2

• Accession: MIMAT0012657
• Description: Daphnia pulex dpu-miR-2 mature miRNA
• Sequence: 61 - UAUCACAGCCAGCUUUGAUGAGC - 83
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68