Stem-loop isc-mir-100

Accession

MI0012263

Description

Ixodes scapularis isc-mir-100 precursor miRNA

Literature search

1 open access papers mention isc-mir-100
(6 sentences)

Sequence

aagaucggagcgcccgcccuAACCCGUAGAUCCGAACUUGUGUccgcgcgaugcaaagcacaaguuccccucugcgggucugggcuggucgcuugccauuc
.......(((((((.((((..(((((((((...((((((((((..((.....))...))))))))))...)))))))))..)))).)).))))).......

Structure

aagaucg     -  c    uA         UCC          -cc  g 
       gagcg cc gccc  ACCCGUAGA   GAACUUGUGU   gc c
       ||||| || ||||  |||||||||   ||||||||||   || g
       uucgc gg cggg  ugggcgucu   cuugaacacg   cg a
cuuaccg     u  u    uc         ccc          aaa  u 

Annotation confidence Not enough data

Genome context

DS978597: 252465-252565 [-]

Mature isc-miR-100

• Accession: MIMAT0012683
• Description: Ixodes scapularis isc-miR-100 mature miRNA
• Sequence: 21 - AACCCGUAGAUCCGAACUUGUGU - 43
• Evidence: not_experimental

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68