Stem-loop mdo-mir-455

Accession

MI0012509

Description

Monodelphis domestica mdo-mir-455 precursor miRNA

Sequence

263 reads, 4 reads per million, 5 experiments

ucccuggcgugagggUAUGUGCCCUUGGACUACAUCGuggaagccaacaccAUGCAGUCCAUGGGCAUAUACAcuugccucaagguu
.((.(((.(((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))).))).))..

Structure

-u  c   c     g          U      A   C   gaa 
  cc ugg gugag gUAUGUGCCC UGGACU CAU Gug   g
  || ||| ||||| |||||||||| |||||| ||| |||    
  gg acu cguuc CAUAUACGGG ACCUGA GUA cac   c
uu  a   c     A          U      C   c   aac 

Annotation confidence Medium

Genome context

chr1: 451465629-451465715 [-]

Mature mdo-miR-455-5p

• Accession: MIMAT0012752
• Description: Monodelphis domestica mdo-miR-455-5p mature miRNA
• Sequence: 16 - UAUGUGCCCUUGGACUACAUCG - 37
• Evidence: experimental ; Illumina [2]

Mature mdo-miR-455-3p

• Accession: MIMAT0026942
• Description: Monodelphis domestica mdo-miR-455-3p mature miRNA
• Sequence: 52 - AUGCAGUCCAUGGGCAUAUACA - 73
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45