Stem-loop eca-mir-33b

Accession

MI0012782

Description

Equus caballus eca-mir-33b precursor miRNA

Literature search

1 open access papers mention eca-mir-33b
(1 sentences)

Sequence

18608 reads, 28.0 reads per million, 136 experiments

GUGCAUUGCUGUUGCAUUGcacgugugugaggcgggugCAGUGCCUCGGCAGUGCA
.((((((((((..(((((((((.(((.....))).)))))))))..))))))))))

Structure

G          UU         g   g 
 UGCAUUGCUG  GCAUUGcac ugu u
 ||||||||||  ||||||||| ||| g
 ACGUGACGGC  CGUGACgug gcg a
-          UC         g   g 

Annotation confidence High

Genome context

11: 60435456-60435511 [+]

Mature eca-miR-33b-5p

• Accession: MIMAT0013037
• Description: Equus caballus eca-miR-33b-5p mature miRNA
• Sequence: 1 - GUGCAUUGCUGUUGCAUUG - 19
• Evidence: not_experimental

Mature eca-miR-33b-3p

• Accession: MIMAT0051385
• Description: Equus caballus eca-miR-33b-3p mature miRNA
• Sequence: 39 - CAGUGCCUCGGCAGUGCA - 56
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131