Stem-loop eca-mir-19b-2

Accession

MI0012949

Description

Equus caballus eca-mir-19b-2 precursor miRNA

Literature search

1 open access papers mention eca-mir-19b-2
(2 sentences)

Sequence

1399 reads, 212 reads per million, 1 experiments

acacugcuacuuacgauuaguuuugcagguuugcauuucagcguauauauguauauauggcUGUGCAAAUCCAUGCAAAACUGAuugugauaaugu
..........(((((((((((((((((((((((((...((((.((((((....)))))))))))))))).)).)))))))))))))))))......

Structure

acacugcuac                 -  -      uuu    g      u 
          uuacgauuaguuuugca gg uuugca   cagc uauaua g
          ||||||||||||||||| || ||||||   |||| ||||||  
          aguguuAGUCAAAACGU CC AAACGU   GUcg guauau u
----uguaau                 A  U      ---    -      a 

Annotation confidence Not enough data

Genome context

chrX: 106692173-106692268 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from eca-mir-19b-2

Mature eca-miR-19b

• Accession: MIMAT0013087
• Description: Equus caballus eca-miR-19b mature miRNA
• Sequence: 62 - UGUGCAAAUCCAUGCAAAACUGA - 84
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131