Stem-loop eca-mir-767

Accession

MI0012986

Description

Equus caballus eca-mir-767 precursor miRNA

Sequence

99 reads, 15 reads per million, 1 experiments

gcuuuuguauuauagguuuuugcucaUGCACCAUGGUUGUCUGAGCAUGcagcaugcuugUCUGCUCAUACUCCAUGGUUCCUgagcaggaaccuucauugccuacug
......(((....(((((((((((((.(.(((((((..((.((((((.((((.....)))).)))))).)).))))))).).)))))))))))))....)))......

Structure

gcuuuu   uuau             U C       UU  C      U    c 
      gua    agguuuuugcuca G ACCAUGG  GU UGAGCA Gcag a
      |||    ||||||||||||| | |||||||  || |||||| |||| u
      cgu    uccaaggacgagU C UGGUACC  CA ACUCGU Uguu g
gucauc   uacu             C U       -U  U      C    c 

Annotation confidence Not enough data

Genome context

chrX: 120988447-120988554 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from eca-mir-767

Mature eca-miR-767-5p

• Accession: MIMAT0013245
• Description: Equus caballus eca-miR-767-5p mature miRNA
• Sequence: 27 - UGCACCAUGGUUGUCUGAGCAUG - 49
• Evidence: not_experimental

Mature eca-miR-767-3p

• Accession: MIMAT0013246
• Description: Equus caballus eca-miR-767-3p mature miRNA
• Sequence: 61 - UCUGCUCAUACUCCAUGGUUCCU - 83
• Evidence: not_experimental

References

1. PubMed ID: 19406225
   In silico detection and characteristics of novel microRNA genes in the Equus caballus genome using an integrated ab initio and comparative genomic approach
   "Zhou M, Wang Q, Sun J, Li X, Xu L, Yang H, Shi H, Ning S, Chen L, Li Y, He T, Zheng Y"
   "Genomics (2009) 94:125-131