Stem-loop ola-mir-430c-4

Accession

MI0013015

Description

Oryzias latipes ola-mir-430c-4 precursor miRNA

Literature search

3 open access papers mention ola-mir-430c-4
(11 sentences)

Sequence

34645 reads, 4382.0 reads per million, 46 experiments

ccuuucuuagcacuauUUCCUGACCAAAACAUACCAACACnnnnnnnnnnucuuugcaguaagUGCUACAUGUUGGGGUAGUCUUGGUgucuagcaa
......(((((((((....(((.((..(((((.....(((......................)))....)))))..)))))...))))).))))...

Structure

ccuuuc    -     uUUC   A  AA     ACCAA   nnnnnnnnnn 
      uuag cacua    CUG CC  AACAU     CAC          u
      |||| |||||    ||| ||  |||||     |||           
      gauc gUGGU    GAU GG  UUGUA     GUg          c
---aac    u     -UCU   -  GG     -CAUC   aaugacguuu 

Annotation confidence Medium

Genome context

Unknown

Mature ola-miR-430c-4-5p

• Accession: MIMAT0057057
• Description: Oryzias latipes ola-miR-430c-4-5p mature miRNA
• Sequence: 17 - UUCCUGACCAAAACAUACCAACAC - 40
• Evidence: experimental ; in-situ [1], Northern [1]

Mature ola-miR-430c-3p

• Accession: MIMAT0013805
• Description: Oryzias latipes ola-miR-430c-3p mature miRNA
• Sequence: 64 - UGCUACAUGUUGGGGUAGUCUUGGU - 88
• Evidence: experimental ; in-situ [1], Northern [1]

References

1. PubMed ID: 19770025
   Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development
   "Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K"
   "Gene (2010) 449:41-49