Stem-loop sbi-MIR162

Accession

MI0013252

Description

Sorghum bicolor sbi-MIR162 precursor miRNA

Gene family

MIPF0000169; MIR162_2

Sequence

gggcgcagugguuuaucgaucucuuccuugccuugugcuaguccagaaguaguggugguucaagcguuuauugcugcaauaacuugcaaaacaacgcgggaaucgaUCGAUAAACCUCUGCAUCCAG
(((.((((.((((((((((((..(((((.((.((((((.(((......((((((((((.........))))))))))....))).))...)))).)))))))..)))))))))))).)))).)))..

Structure

--   c    u            uc     u  c    ---  u   ccagaa          uuc 
  ggg gcag gguuuaucgauc  uuccu gc uugu   gc agu      guaguggugg   a
  ||| |||| ||||||||||||  ||||| || ||||   || |||      ||||||||||   a
  CCU CGUC CCAAAUAGCUag  aaggg cg aaca   cg uca      cgucguuauu   g
GA   A    U            cu     -  c    aaa  u   --auaa          ugc 

Annotation confidence Not enough data

Genome context

chr4: 55732922-55733048 [+]

Mature sbi-miR162

• Accession: MIMAT0014041
• Description: Sorghum bicolor sbi-miR162 mature miRNA
• Sequence: 107 - UCGAUAAACCUCUGCAUCCAG - 127
• Evidence: not_experimental

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716