Stem-loop sbi-MIR169o

Accession

MI0013253

Description

Sorghum bicolor sbi-MIR169o precursor miRNA

Gene family

MIPF0000012; MIR169_1

Literature search

4 open access papers mention sbi-MIR169o
(23 sentences)

Sequence

aUAGCCAAGGAUGAUUUGCCUGuagcaaccucugagugcuccugcugccauggcagucaggagcgccaagugggugcuucuccgggcaaaucaucugggcuag
.(((((..((((((((((((((.((((.((.((..(((((((((((((....)))).)))))))))..)).)).))))....)))))))))))))).))))).

Structure

a     AA              ---u    a  u  ga         -    c 
 UAGCC  GGAUGAUUUGCCUG    agca cc cu  gugcuccug cugc a
 |||||  ||||||||||||||    |||| || ||  ||||||||| ||||  
 aucgg  ucuacuaaacgggc    ucgu gg ga  cgcgaggac gacg u
g     -g              cucu    g  u  ac         u    g 

Annotation confidence Not enough data

Genome context

chr1: 1019419-1019521 [-]

Mature sbi-miR169o

• Accession: MIMAT0014042
• Description: Sorghum bicolor sbi-miR169o mature miRNA
• Sequence: 2 - UAGCCAAGGAUGAUUUGCCUG - 22
• Evidence: not_experimental

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716