miRBase entry: osa-MIR2932

Stem-loop osa-MIR2932


Accession
MI0013274
Description
Oryza sativa osa-MIR2932 precursor miRNA


Sequence

16160 reads, 135.0 reads per million, 117 experiments
aaagaguauauuaaaucucucaucguuucucAUGUAGUGUGCAAAGCAGGACcagggaacuuacuuaugcggcuacaacguaugcgAGUAUGCCCACUACCUAUCaaaccaaauaugcaccacacgagagcuugauguac
..((((..........))))(((((.(((((.(((.(.(((((....(((....(((....((((((((((.......)))))..)))))..)))....))).............))))))))).)))))..)))))...

Structure
aaagaguauauuaaaucucu     -u     A   A U     ---------AAGC   ACca   aacu     --     gc 
                    caucg  uucuc UGU G GUGCA             AGG    ggg    uacuu  augcg  u
                    |||||  ||||| ||| | |||||             |||    |||    |||||  |||||  a
                    guagu  gagag aca c cacgu             UCC    CCC    AUGAg  uaugc  c
-----------------cau     uc     c   - -     auaaaccaaaCUA   AUCA   --GU     cg     aa 


Annotation confidence Low
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Genome context
10: 10556623-10556762 [+]

Database links

Mature osa-miR2932-5p

Accession MIMAT0056159
Description Oryza sativa osa-miR2932-5p mature miRNA
Sequence 32 - AUGUAGUGUGCAAAGCAGGAC - 52
Evidence experimental
unknown

Mature osa-miR2932-3p

Accession MIMAT0014063
Description Oryza sativa osa-miR2932-3p mature miRNA
Sequence 87 - AGUAUGCCCACUACCUAUC - 105
Evidence experimental
cloned [1]

References

  1. PubMed ID: 20131478
    Cloning and validation of novel miRNA from basmati rice indicates cross talk between abiotic and biotic stresses
    "Sanan-Mishra N, Kumar V, Sopory SK, Mukherjee SK"
    "Mol Genet Genomics (2009) 282:463-474