Stem-loop rco-MIR319a

Accession

MI0013406

Description

Ricinus communis rco-MIR319a precursor miRNA

Literature search

2 open access papers mention rco-MIR319a
(6 sentences)

Sequence

uuaagagagcuuucuucaguccacucauggguggcgguaggauuuaauuagcugccgacucauucauccaaauacugaguuaaaaaguucagaaaacaaaaggggcgggugcuguagaaaagaagguuuacccaguaaaugagugaaugaugcgggagacaaauugaaucuuaagcuuccuguacUUGGACUGAAGGGAGCUCCCUuuacu
..(((.(((((((((((((((((...(((((.(((..((((((((((((.(((.(((..((((((((.((..(((((.........(((.....)))......(((....)))(((((........))))).)))))..)).))))))))..))).)).).)))))))))))).))).)))))...))))))))))))))))).)))....

Structure

--uu   a                 cuc     u   gg            a -  g   ac        c  aa     aguuaaaaaguucagaaaacaaaaggggcgggugcu     aaa 
    aag gagcuuucuucagucca   auggg ggc  uaggauuuaauu g cu ccg  ucauucau ca  uacug                                    guaga   g
    ||| |||||||||||||||||   ||||| |||  |||||||||||| | || |||  |||||||| ||  |||||                                    |||||    
    uUC CUCGAGGGAAGUCAGGU   ugucc ucg  auucuaaguuaa c ga ggc  aguaagug gu  augac                                    cauuu   a
ucau   C                 Uca     u   -a            a a  g   gu        a  aa     -----------------------------------c     gga 

Annotation confidence Not enough data

Genome context

EQ973774.1: 3280054-3280264 [-]

Mature rco-miR319a

• Accession: MIMAT0014180
• Description: Ricinus communis rco-miR319a mature miRNA
• Sequence: 186 - UUGGACUGAAGGGAGCUCCCU - 206
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995