miRBase entry: aae-mir-282-1

Stem-loop aae-mir-282-1


Accession
MI0013517
Description
Aedes aegypti aae-mir-282-1 precursor miRNA
Gene family
MIPF0000150; mir-282

Literature search
2 open access papers mention aae-mir-282-1
(4 sentences)

Sequence

78 reads, 4 reads per million, 2 experiments
aucgucaucgucaucgucgcacagguguAAUCUAGCCUCUCCUAGGCUUUGUCUGuuaccuuccuugggaauuccacuagccagACAUAGCCUGACAGAGGUUAGGugaaaucugaaaagucaacggccaacggu
......(((((..((((.((.(((((...(((((((((((..((((((.((((((((((((.....)))........))).)))))).))))))..)))))))))))...)))))....))..))))...)))))

Structure
aucguc     -ca    -c  ---a     guA           CC      U      -   --------   u 
      aucgu   ucgu  gc    caggu   AUCUAGCCUCU  UAGGCU UGUCUG uua        ccu c
      |||||   ||||  ||    |||||   |||||||||||  |||||| |||||| |||        ||| c
      uggca   ggca  ug    gucua   uGGAUUGGAGA  GUCCGA ACAgac gau        ggg u
------     acc    ac  aaaa     aag           CA      U      c   caccuuaa   u 


Annotation confidence Not enough data
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Genome context
supercont1.369: 992964-993098 [+]

Database links

Mature aae-miR-282-5p

Accession MIMAT0014311
Description Aedes aegypti aae-miR-282-5p mature miRNA
Sequence 29 - AAUCUAGCCUCUCCUAGGCUUUGUCUG - 55
Evidence experimental
454 [1]

Mature aae-miR-282-3p

Accession MIMAT0014312
Description Aedes aegypti aae-miR-282-3p mature miRNA
Sequence 85 - ACAUAGCCUGACAGAGGUUAGG - 106
Evidence experimental
454 [1]

References

  1. PubMed ID: 19961592
    Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
    Li S, Mead EA, Liang S, Tu Z
    BMC Genomics (2009) 10:581