Stem-loop hma-mir-3006

Accession

MI0013867

Description

Hydra magnipapillata hma-mir-3006 precursor miRNA

Sequence

gugguauauuagcuaauucugugugcugcaauuuuguuaggucgauucguUGAUUUAUAAUAGGAGAGCAUAUGAUUgguguaauauaugcu
...(((((((((((((((..(((((((......((((.(((((((....)))))))))))......)))))))))))))).))))))))...

Structure

gug        -       cu       gcaauu    u       u 
   guauauua gcuaauu  gugugcu      uugu aggucga u
   |||||||| |||||||  |||||||      |||| |||||||  
   uauauaau uggUUAG  UAUACGA      AAUA UUUAGUu c
ucg        g       --       GAGGAU    -       g 

Annotation confidence Not enough data

Genome context

Unknown

Mature hma-miR-3006

• Accession: MIMAT0014673
• Description: Hydra magnipapillata hma-miR-3006 mature miRNA
• Sequence: 51 - UGAUUUAUAAUAGGAGAGCAUAUGAUU - 77
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20228792
   The dynamic genome of Hydra
   "Chapman JA, Kirkness EF, Simakov O, Hampson SE, Mitros T, Weinmaier T, Rattei T, Balasubramanian PG, Borman J, Busam D, Disbennett K, Pfannkoch C, Sumin N, Sutton GG, Viswanathan LD, Walenz B, Goodstein DM, Hellsten U, Kawashima T, Prochnik SE, Putnam NH,"
   "Nature (2010) 464:592-596