Stem-loop mmu-mir-669p-1

Accession

MI0014064

Symbol

MGI: Mir669p-1

Description

Mus musculus mmu-mir-669p-1 precursor miRNA

Literature search

8 open access papers mention mmu-mir-669p-1
(11 sentences)

Sequence

13613 reads, 191 reads per million, 99 experiments

gugcauguguguauAGUUGUGUGUGCAUGUUCAUGUCUauauuugaauauaCAUAACAUACACACACACACGUAUaaacgcaagcac
((((.(((((.((((((((((((((.(((((.((((.(((......))).))))))))).)))))))).)).)))).))))).))))

Structure

    a     g    -  -        C     C    C   au 
gugc ugugu uauA GU UGUGUGUG AUGUU AUGU Uau  u
|||| ||||| |||| || |||||||| ||||| |||| |||   
cacg acgca aUAU CA ACACACAC UACAA UACa aua  u
    a     a    G  C        A     -    u   ag 

Annotation confidence High

Genome context

chr2: 10489116-10489202 [+]

Clustered miRNAs

24 other miRNAs are < 10 kb from mmu-mir-669p-1

Mature mmu-miR-669p-5p

• Accession: MIMAT0014889
• Description: Mus musculus mmu-miR-669p-5p mature miRNA
• Sequence: 15 - AGUUGUGUGUGCAUGUUCAUGUCU - 38
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-669p-3p

• Accession: MIMAT0014890
• Description: Mus musculus mmu-miR-669p-3p mature miRNA
• Sequence: 52 - CAUAACAUACACACACACACGUAU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009