miRBase entry: aae-mir-929-1

Stem-loop aae-mir-929-1


Accession
MI0014710
Description
Aedes aegypti aae-mir-929-1 precursor miRNA
Gene family
MIPF0000447; mir-929


Sequence

2603 reads, 129 reads per million, 2 experiments
ugccuacgacugguccaaAUUGACUCUAGUAGGGAGUCCuuguguacgagugacucccuaacggagucagauugaacccgguaggaug
..(((((....(((.(((.((((((((..(((((((((((((....)))).)))))))))..)))))))).))).)))..)))))...

Structure
-ug     gacu   c   A        AG         -    u 
   ccuac    ggu caa UUGACUCU  UAGGGAGUC Cuug g
   |||||    ||| ||| ||||||||  ||||||||| ||||  
   ggaug    cca guu gacugagg  aucccucag gagc u
gua     --gc   a   a        ca         u    a 


Annotation confidence High
Do you think this miRNA is real?

Genome context
supercont1.260: 788396-788483 [-]

Database links

Mature aae-miR-929

Accession MIMAT0015648
Description Aedes aegypti aae-miR-929 mature miRNA
Sequence 19 - AUUGACUCUAGUAGGGAGUCC - 39
Evidence experimental
454 [1]

References

  1. PubMed ID: 19961592
    Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
    Li S, Mead EA, Liang S, Tu Z
    BMC Genomics (2009) 10:581