Accession
MI0015040
Description
Pongo pygmaeus
ppy-mir-542 precursor miRNA
Sequence
cagaucucagacaucUCGGGGAUCAUCAUGUCACGAGAuaccagugugcacuUGUGACAGAUUGAUAACUGAAAggucugggagccacucaucuuc
....((((((((...((((..((((...(((((((((.(((....)))..)))))))))...))))..))))...)))))))).............
....((((((((...((((..((((...(((((((((.(((....)))..)))))))))...))))..))))...)))))))).............
Structure
---------caga auc GG UCA -A c
ucucagac UCGG AUCA UGUCACGAG uac a
|||||||| |||| |||| ||||||||| |||
agggucug AGUC UAGU ACAGUGUuc gug g
cuucuacucaccg gAA AA UAG ac u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chrX: 134000586-134000681 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from ppy-mir-542
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppy-miR-542-5p
| Accession | MIMAT0015991 |
| Description | Pongo pygmaeus ppy-miR-542-5p mature miRNA |
| Sequence | 16 - UCGGGGAUCAUCAUGUCACGAGA - 38 |
| Evidence | not_experimental |
Mature ppy-miR-542-3p
| Accession | MIMAT0015992 |
| Description | Pongo pygmaeus ppy-miR-542-3p mature miRNA |
| Sequence | 53 - UGUGACAGAUUGAUAACUGAAA - 74 |
| Evidence | not_experimental |
References
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