Stem-loop bmo-mir-2733e-3

Accession

MI0015937

Description

Bombyx mori bmo-mir-2733e-3 precursor miRNA

Literature search

2 open access papers mention bmo-mir-2733e-3
(5 sentences)

Sequence

11 reads, 4 reads per million, 1 experiments

uuugcuggacugucuauaaugucuuucaacaauagcuauuacuucuccagaagacauucacauucugUCACUGGGAAUGUAAUAGCUAUuuccaaaauu
.(((..((((..........))))..))).(((((((((((((((.((((..((((.........)))).))))))).)))))))))))).........

Structure

uuugcuggacugucuauaaugucuuucaac            -   u    aa    uuc 
                              aauagcuauuac uuc ccag  gaca   a
                              |||||||||||| ||| ||||  ||||   c
                              uUAUCGAUAAUG AAG GGUC  CUgu   a
---------------------uuaaaaccu            U   -    -A    cuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature bmo-miR-2733e

• Accession: MIMAT0013617
• Description: Bombyx mori bmo-miR-2733e mature miRNA
• Sequence: 68 - UCACUGGGAAUGUAAUAGCUAU - 89
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 20089182
   Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
   Jagadeeswaran G, Zheng Y, Sumathipala N, Jiang H, Arrese EL, Soulages JL, Zhang W, Sunkar R
   BMC Genomics (2010) 11:52