Stem-loop hsa-mir-3620

Accession

MI0016011

Symbol

HGNC: MIR3620

Description

Homo sapiens hsa-mir-3620 precursor miRNA

Literature search

3 open access papers mention hsa-mir-3620
(4 sentences)

Sequence

398 reads, 4 reads per million, 52 experiments

gugaggugggggccagcagggaGUGGGCUGGGCUGGGCUGGGCCaagguacaaggccUCACCCUGCAUCCCGCACCCAG
.((.((((.(((...((((((.(.(((((..(...(.((......)).).)..)))))).))))))..))).)))))).

Structure

g  a    g   cca      a U     GG CUG G  GG 
 ug ggug ggg   gcaggg G GGGCU  G   G CU  G
 || |||| |||   |||||| | |||||  |   | ||   
 AC CCAC CCC   CGUCCC C Uccgg  c   u ga  C
G  -    G   -UA      A -     aa --a g  aC 

Annotation confidence High

Genome context

chr1: 228097263-228097341 [+]

Mature hsa-miR-3620-3p

• Accession: MIMAT0018001
• Description: Homo sapiens hsa-miR-3620-3p mature miRNA
• Sequence: 58 - UCACCCUGCAUCCCGCACCCAG - 79
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-3620-5p

• Accession: MIMAT0022967
• Description: Homo sapiens hsa-miR-3620-5p mature miRNA
• Sequence: 23 - GUGGGCUGGGCUGGGCUGGGCC - 44
• Evidence: not_experimental

References

1. PubMed ID: 20459774
   Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls
   Witten D, Tibshirani R, Gu SG, Fire A, Lui WO
   BMC Biol (2010) 8:58