miRBase entry: ame-mir-3786

Stem-loop ame-mir-3786


Accession
MI0016195
Description
Apis mellifera ame-mir-3786 precursor miRNA


Sequence

acaggaacaaaacguguccgacguCUUGUCCUGGUUCAUGUAGGGCGgaauguuacgcaaacacUCUGUAUGGCUCAGGACGAUACgucuggcucguccaacca
...((......(((.(((.(((((.(((((((((.((((((((((.(...(((...)))..).)))))))))).))))))))).))))).))).)))....)).

Structure
aca  aacaaa   u   c     C         U          C gaa   u 
   gg      acg guc gacgu UUGUCCUGG UCAUGUAGGG G   ugu  
   ||      ||| ||| ||||| ||||||||| |||||||||| |   ||| a
   cc      ugc cgg cugCA AGCAGGACU GGUAUGUCUc c   acg  
--a  --aacc   u   u     U         C          a -aa   c 


Annotation confidence Not enough data
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Genome context
CM000065.5: 4694619-4694722 [-]

Database links

Mature ame-miR-3786-5p

Accession MIMAT0018565
Description Apis mellifera ame-miR-3786-5p mature miRNA
Sequence 25 - CUUGUCCUGGUUCAUGUAGGGCG - 47
Evidence experimental
SOLID [1], Illumina [3]

Mature ame-miR-3786-3p

Accession MIMAT0037387
Description Apis mellifera ame-miR-3786-3p mature miRNA
Sequence 65 - UCUGUAUGGCUCAGGACGAUAC - 86
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670

  3. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226