Stem-loop hsa-mir-3909

Accession

MI0016413

Symbol

HGNC: MIR3909

Description

Homo sapiens hsa-mir-3909 precursor miRNA

Literature search

1 open access papers mention hsa-mir-3909
(1 sentences)

Sequence

1439 reads, 6 reads per million, 95 experiments

gguaugcuguugcgcuguccuuccucuggggagcaggcuccgggggacagggaaaagcacacaaggaacuUGUCCUCUAGGGCCUGCAGUCUcaugggagagugacaugcaccaggacc
(((...(((.((((.((((((((((.(((((.((((((((.((((((((((.................)))))))))).))))))))..))))).)))).)).)))))))).))).)))

Structure

   aug   u    c    -  -    c     -a        c          gaaaagc 
ggu   cug ugcg uguc cu uccu ugggg  gcaggcuc gggggacagg       a
|||   ||| |||| |||| || |||| |||||  |||||||| ||||||||||       c
cca   gac acgu acag ga aggg acUCU  CGUCCGGG UCUCCUGUuc       a
   --g   c    -    u  g    u     GA        A          aaggaac 

Annotation confidence Not enough data

Genome context

chr22: 35335640-35335758 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-3909

Disease association

hsa-mir-3909 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-3909

• Accession: MIMAT0018183
• Description: Homo sapiens hsa-miR-3909 mature miRNA
• Sequence: 71 - UGUCCUCUAGGGCCUGCAGUCU - 92
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637


2. PubMed ID: 20498841
   Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers
   Liao JY, Ma LM, Guo YH, Zhang YC, Zhou H, Shao P, Chen YQ, Qu LH
   PLoS One (2010) 5:e10563