Stem-loop far-MIR169

Accession

MI0016612

Description

Festuca arundinacea far-MIR169 precursor miRNA

Sequence

ggcacgagggcaaagccuuacauggcugcaagggccuuaccucugaUAGCCAAGGAUGACUUGCCUAugucuucuuccucccucagaugccuaauuagccuuggagguguggggucucaugggcagucaccuuggcuagccugaguggcu
(.(((..((((..((((......)))).(((((......))).)).(((((((((.(((((.(((((((.....((((.(((((.((.((.......)).)).)))).).))))...)))))))))))))))))))))))))..))).).

Structure

- g   ga    aaagccuuacauggcugcaagggccuuaccucuga         A     U       ucuuc    u -    a  u  cu 
 g cac  gggc                                   UAGCCAAGG UGACU GCCUAug     uucc c ccuc ga gc  a
 | |||  ||||                                   ||||||||| ||||| |||||||     |||| | |||| || ||  a
 c gug  uccg                                   aucgguucc acuga cggguac     gggg g ggag uu cg  u
u g   ag    -----------------------------------         -     -       --ucu    u u    g  c  au 

Annotation confidence Not enough data

Genome context

Unknown

Mature far-miR169

• Accession: MIMAT0018371
• Description: Festuca arundinacea far-miR169 mature miRNA
• Sequence: 47 - UAGCCAAGGAUGACUUGCCUA - 67
• Evidence: not_experimental

References

1. PubMed ID: 20213187
   Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application
   "Unver T, Bakar M, Shearman RC, Budak H"
   "Mol Genet Genomics (2010) 283:397-413