miRBase entry: oar-mir-376e

Stem-loop oar-mir-376e


Accession
MI0016932
Description
Ovis aries oar-mir-376e precursor miRNA


Sequence

6100 reads, 1364 reads per million, 13 experiments
gcucaauguuugauauucaaaaGGUGGAUAUUCCUUCUAUGUUUacaggauugacagcuaAACAUAGAGGAAAAUCCACAUUuuaaguaucuaaauuugcuuuuga
((.....((((((((((.((((.((((((.(((((.((((((((((.(......).).)))))))))))))).)))))).)))).)))))).))))..))......

Structure
------  ucaau    -      c    G      A     U         - a ga 
      gc     guuu gauauu aaaa GUGGAU UUCCU CUAUGUUUa c g  u
      ||     |||| |||||| |||| |||||| ||||| ||||||||| | |   
      cg     uaaa cuauga uuUU CACCUA AAGGA GAUACAAau g c  u
aguuuu  ---uu    u      a    A      A     -         c a ag 


Annotation confidence High
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Genome context
chr18: 64537482-64537587 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from oar-mir-376e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-miR-376e-5p

Accession MIMAT0019277
Description Ovis aries oar-miR-376e-5p mature miRNA
Sequence 23 - GGUGGAUAUUCCUUCUAUGUUU - 44
Evidence experimental
Illumina [1]

Mature oar-miR-376e-3p

Accession MIMAT0019278
Description Ovis aries oar-miR-376e-3p mature miRNA
Sequence 61 - AACAUAGAGGAAAAUCCACAUU - 82
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20944086
    Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
    "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
    "Genome Res (2010) 20:1651-1662